STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA6GATA binding protein 6. (508 aa)    
Predicted Functional Partners:
LMCD1
LIM and cysteine rich domains 1.
    
 0.938
NKX2-5
NK2 homeobox 5.
   
 0.868
FOXA2
Forkhead box A2.
    
 0.761
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.742
FOXA1
Forkhead box A1.
    
 0.720
SOX18
SRY-box transcription factor 18.
   
 0.660
BMP4
Bone morphogenetic protein 4.
    
 0.656
SOX7
Uncharacterized protein.
    
 0.651
HAND2
Heart and neural crest derivatives expressed 2.
   
 0.648
ZFPM1
Zinc finger protein, FOG family member 1.
   
 0.648
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.