Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RORARAR related orphan receptor A. (485 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.786
NRIP1
Nuclear receptor interacting protein 1.
    
  0.676
PAFAH1B2
Platelet activating factor acetylhydrolase 1b catalytic subunit 2.
      
 0.656
CLOCK
Clock circadian regulator.
    
 0.619
EP300
E1A binding protein p300.
    
 0.618
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.603
BHLHE41
Basic helix-loop-helix family member e41.
    
 
 0.593
PPARGC1A
PPARG coactivator 1 alpha.
    
 0.585
HIVEP1
Human immunodeficiency virus type I enhancer binding protein 1.
    
 
 0.563
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.557
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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