STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SENP5SUMO specific peptidase 5. (248 aa)    
Predicted Functional Partners:
LAS1L
Uncharacterized protein.
   
 0.890
TEX10
Testis expressed 10.
   
 0.874
WDR18
WD repeat domain 18.
    
 0.870
SENP6
SUMO specific peptidase 6.
   
 0.846
SUMO1
Small ubiquitin like modifier 1.
   
 0.846
NOL9
Nucleolar protein 9.
   
 0.834
ENSAPLP00000029099
Ubiquitin-like domain-containing protein.
   
 0.802
SUMO2
Small ubiquitin-related modifier.
   
 0.774
RANGAP1
Ran GTPase activating protein 1.
    
 
 0.678
UBA2
SUMO-activating enzyme subunit 2; The heterodimer acts as an E1 ligase for SUMO1, SUMO2, SUMO3, and probably SUMO4. It mediates ATP-dependent activation of SUMO proteins followed by formation of a thioester bond between a SUMO protein and a conserved active site cysteine residue on UBA2/SAE2. Belongs to the ubiquitin-activating E1 family.
   
 
 0.666
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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