Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALB1Calbindin 1. (262 aa)    
Predicted Functional Partners:
PVALB
Parvalbumin; Belongs to the parvalbumin family.
      
 0.937
SDF4
Stromal cell derived factor 4.
      
 0.843
SST
Somatostatin domain-containing protein.
   
  
 0.776
U3J0F4_ANAPP
Uncharacterized protein.
    
 
 0.716
OTX2
Orthodenticle homeobox 2.
   
  
 0.666
GAD1
Glutamate decarboxylase 1.
   
 
 0.655
TRPV6
Transient receptor potential cation channel subfamily V member 6; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.653
NPY
Neuropeptide Y.
      
 0.641
DECR1
2,4-dienoyl-CoA reductase 1.
    
 0.627
SLC17A6
Solute carrier family 17 member 6.
   
 
 0.623
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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