STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP1BP3Heterochromatin protein 1 binding protein 3. (572 aa)    
Predicted Functional Partners:
ENSAPLP00000028245
Uncharacterized protein.
   
 0.755
MEA1
Male-enhanced antigen 1.
      
 0.611
ENSAPLP00000019633
CS domain-containing protein.
    
 
 0.604
KPNB1
Karyopherin subunit beta 1.
    
   0.600
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
     
 0.594
RCC2
Regulator of chromosome condensation 2.
    
 0.565
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
      
 0.555
NHLRC2
NHL repeat containing 2.
      
 0.545
U3I833_ANAPP
Histone H3; Belongs to the histone H3 family.
   
 0.502
ENSAPLP00000026892
annotation not available
   
 0.502
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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