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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX15DEAH-box helicase 15. (737 aa)    
Predicted Functional Partners:
TFIP11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
   
 0.994
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.993
RBM17
RNA binding motif protein 17.
   
 0.991
CDC40
Cell division cycle 40.
   
 0.987
UTP3
UTP3 small subunit processome component.
   
 0.978
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.973
SUGP1
SURP and G-patch domain containing 1.
   
 0.968
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.967
CDC5L
Cell division cycle 5 like.
 
 
 0.966
PRPF19
Pre-mRNA processing factor 19.
   
 0.963
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.