STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IE72_ANAPPC2H2-type domain-containing protein. (115 aa)    
Predicted Functional Partners:
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.872
BDP1
SANT domain-containing protein.
    
 0.799
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.728
BRF1
BRF1 domain-containing protein.
   
 0.680
ENSAPLP00000020086
TFIIB domain-containing protein.
   
 0.680
ENSAPLP00000020531
TFIIB-type domain-containing protein.
   
 0.680
POLR2L
RNA polymerase II subunit L.
    
 0.680
POLR2F
RNA polymerase II subunit F.
   
 0.668
GTF3C4
General transcription factor IIIC subunit 4.
    
 0.644
U3IEY2_ANAPP
Uncharacterized protein.
    
 0.628
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.