STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IE83_ANAPPUncharacterized protein. (131 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.588
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.545
SMN1
Tudor domain-containing protein.
   
 0.527
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.490
DDX20
DEAD-box helicase 20; Belongs to the DEAD box helicase family.
   
 0.466
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
  0.437
U3I2H1_ANAPP
Uncharacterized protein.
     
 0.431
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
    
  0.421
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.419
UBXN7
UBX domain-containing protein 7.
   
 
 0.417
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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