Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CHD7Chromodomain helicase DNA binding protein 7. (2936 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
   
 0.776
OTUD7B
OTU deubiquitinase 7B.
    
 
 0.725
PSMD4
Proteasome 26S subunit, non-ATPase 4.
    
 
 0.719
RNF169
Ring finger protein 169.
     
 0.695
CTNNB1
Catenin beta 1.
    
 0.687
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.573
ADNP
Activity dependent neuroprotector homeobox.
   
 
 0.567
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 
 0.516
SLC25A15
Solute carrier family 25 member 15; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.512
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 
 0.510
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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