STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAP6Transmembrane protein 8A. (709 aa)    
Predicted Functional Partners:
NPRL3
NPR3 like, GATOR1 complex subunit.
      
 0.805
RHBDF1
Rhomboid 5 homolog 1.
   
  
 0.646
HBZ
Hemoglobin subunit zeta; Belongs to the globin family.
      
 0.611
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
      
 0.611
HBAA
Hemoglobin subunit alpha-A; Involved in oxygen transport from the lung to the various peripheral tissues.
      
 0.611
AP3S2
Adaptor related protein complex 3 subunit sigma 2.
      
 0.610
LUC7L
LUC7 like.
      
 0.608
ENSAPLP00000019050
Uncharacterized protein.
      
 0.608
U3J101_ANAPP
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.602
USP38
Ubiquitin carboxyl-terminal hydrolase.
      
 0.600
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.