Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
PTP4A1Protein tyrosine phosphatase 4A1. (204 aa)    
Predicted Functional Partners:
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
  0.892
AUP1
AUP1 lipid droplet regulating VLDL assembly factor.
    
   0.691
CNNM1
Cyclin and CBS domain divalent metal cation transport mediator 1.
    
 
 0.651
FLRT2
Fibronectin leucine rich transmembrane protein 2.
      
 0.554
PHF3
PHD finger protein 3.
 
    
 0.553
ENSAPLP00000016646
RabGGT_insert domain-containing protein.
     
  0.545
CHM
Uncharacterized protein.
     
  0.545
CNNM2
Cyclin and CBS domain divalent metal cation transport mediator 2.
    
 
 0.543
ENSAPLP00000028489
CNNM transmembrane domain-containing protein.
    
 
 0.543
ENSAPLP00000028970
Uncharacterized protein.
    
 
 0.543
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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