STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYSM1Myb like, SWIRM and MPN domains 1. (852 aa)    
Predicted Functional Partners:
KAT2B
Lysine acetyltransferase 2B.
   
 0.990
KAT2A
Lysine acetyltransferase 2A.
   
 0.990
CECR2
CECR2 histone acetyl-lysine reader.
   
 0.990
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.975
PSMD7
Proteasome 26S subunit, non-ATPase 7.
   
 0.933
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.932
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
   
 0.921
PSMC1
Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family.
   
 0.916
PSMD6
Proteasome 26S subunit, non-ATPase 6.
   
 0.909
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.906
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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