STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTAF1B-TFIID TATA-box binding protein associated factor 1. (1879 aa)    
Predicted Functional Partners:
TBP
TATA-box binding protein.
    
 
 0.926
TBPL2
TATA-box binding protein like 2.
    
 
 0.888
ENSAPLP00000018885
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.857
TBPL1
TATA-box binding protein like 1.
    
 
 0.800
PHF12
PHD finger protein 12.
   
 
 0.746
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.717
PRPF39
Pre-mRNA processing factor 39.
   
  
 0.688
TAF2
TATA-box binding protein associated factor 2.
   
  
 0.665
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
  
 0.637
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 
 0.635
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.