STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC1ELKS/RAB6-interacting/CAST family member 1. (927 aa)    
Predicted Functional Partners:
RIMS2
C2 domain-containing protein.
    
 
 0.838
ENSAPLP00000029757
Uncharacterized protein.
    
 
 0.838
CMTR1
Cap methyltransferase 1.
      
 0.680
ADSL
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.483
RIMS3
Regulating synaptic membrane exocytosis 3.
    
 
 0.481
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 
 0.481
HSP90B1
Heat shock protein 90 beta family member 1.
      
 0.475
PPFIA1
PTPRF interacting protein alpha 1.
    
 
 0.452
PPFIA4
PTPRF interacting protein alpha 4.
    
 
 0.452
PPFIA2
PTPRF interacting protein alpha 2.
    
 
 0.452
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.