Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD2FAST kinase domains 2. (641 aa)    
Predicted Functional Partners:
TRUB2
TruB pseudouridine synthase family member 2.
   
 0.973
MTERF3
Mitochondrial transcription termination factor 3.
   
 0.959
DDX28
DEAD-box helicase 28.
   
 
 0.938
U3IGX5_ANAPP
PPR_long domain-containing protein.
   
 
 0.912
RPUSD4
RNA pseudouridine synthase D4.
   
 0.869
U3I110_ANAPP
Uncharacterized protein.
      
 0.846
MTERF2
Mitochondrial transcription termination factor 2.
   
 0.835
GRSF1
G-rich RNA sequence binding factor 1.
   
 
 0.789
YARS2
Tyrosine--tRNA ligase.
   
   0.715
JAKMIP1
JAKMIP_CC3 domain-containing protein.
    
   0.706
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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