U3IEY2_ANAPP protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

U3IEY2_ANAPP

Uncharacterized protein. (411 aa)

Predicted Functional Partners:

GTF3C4

0.999

GTF3C1

0.999

GTF3C3

0.999

GTF3C6

0.886

BDP1

0.837

GTF3C5

0.816

ENSAPLP00000020086

0.773

ENSAPLP00000020531

0.773

POLR3A

0.745

POLR2H

0.687

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP1	ENSAPLP00000020086	ENSAPLP00000016873	ENSAPLP00000020086	SANT domain-containing protein.	TFIIB domain-containing protein.	0.954
BDP1	ENSAPLP00000020531	ENSAPLP00000016873	ENSAPLP00000020531	SANT domain-containing protein.	TFIIB-type domain-containing protein.	0.954
BDP1	GTF3C1	ENSAPLP00000016873	ENSAPLP00000003186	SANT domain-containing protein.	General transcription factor IIIC subunit 1.	0.969
BDP1	GTF3C3	ENSAPLP00000016873	ENSAPLP00000015944	SANT domain-containing protein.	General transcription factor IIIC subunit 3.	0.975
BDP1	GTF3C4	ENSAPLP00000016873	ENSAPLP00000000397	SANT domain-containing protein.	General transcription factor IIIC subunit 4.	0.807
BDP1	GTF3C5	ENSAPLP00000016873	ENSAPLP00000003291	SANT domain-containing protein.	General transcription factor IIIC subunit 5.	0.954
BDP1	GTF3C6	ENSAPLP00000016873	ENSAPLP00000008376	SANT domain-containing protein.	General transcription factor IIIC subunit 6.	0.665
BDP1	POLR2H	ENSAPLP00000016873	ENSAPLP00000029477	SANT domain-containing protein.	RNA polymerase II subunit H.	0.654
BDP1	POLR3A	ENSAPLP00000016873	ENSAPLP00000015825	SANT domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.958
BDP1	U3IEY2_ANAPP	ENSAPLP00000016873	ENSAPLP00000005804	SANT domain-containing protein.	Uncharacterized protein.	0.837
ENSAPLP00000020086	BDP1	ENSAPLP00000020086	ENSAPLP00000016873	TFIIB domain-containing protein.	SANT domain-containing protein.	0.954
ENSAPLP00000020086	ENSAPLP00000020531	ENSAPLP00000020086	ENSAPLP00000020531	TFIIB domain-containing protein.	TFIIB-type domain-containing protein.	0.952
ENSAPLP00000020086	GTF3C1	ENSAPLP00000020086	ENSAPLP00000003186	TFIIB domain-containing protein.	General transcription factor IIIC subunit 1.	0.879
ENSAPLP00000020086	GTF3C3	ENSAPLP00000020086	ENSAPLP00000015944	TFIIB domain-containing protein.	General transcription factor IIIC subunit 3.	0.936
ENSAPLP00000020086	GTF3C4	ENSAPLP00000020086	ENSAPLP00000000397	TFIIB domain-containing protein.	General transcription factor IIIC subunit 4.	0.833
ENSAPLP00000020086	GTF3C5	ENSAPLP00000020086	ENSAPLP00000003291	TFIIB domain-containing protein.	General transcription factor IIIC subunit 5.	0.833
ENSAPLP00000020086	GTF3C6	ENSAPLP00000020086	ENSAPLP00000008376	TFIIB domain-containing protein.	General transcription factor IIIC subunit 6.	0.676
ENSAPLP00000020086	POLR2H	ENSAPLP00000020086	ENSAPLP00000029477	TFIIB domain-containing protein.	RNA polymerase II subunit H.	0.680
ENSAPLP00000020086	POLR3A	ENSAPLP00000020086	ENSAPLP00000015825	TFIIB domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.820
ENSAPLP00000020086	U3IEY2_ANAPP	ENSAPLP00000020086	ENSAPLP00000005804	TFIIB domain-containing protein.	Uncharacterized protein.	0.773