Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHX1LIM homeobox 1. (333 aa)    
Predicted Functional Partners:
PAX2
Paired box 2.
   
 0.757
CCNK
Cyclin K; Belongs to the cyclin family.
    
   0.723
LDB2
LIM domain binding 2.
    
 0.693
LDB1
LIM domain binding 1.
    
 0.693
EMX2
Empty spiracles homeobox 2.
    
 0.689
HOXA6
Homeobox A6.
   
 0.660
HOXB4
Homeobox B4.
   
 0.646
FEZF1
FEZ family zinc finger 1.
   
 0.597
PAX5
Paired box 5.
   
 0.596
SSBP2
Single stranded DNA binding protein 2.
    
 
 0.583
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.