Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHSGAlpha 2-HS glycoprotein. (345 aa)    
Predicted Functional Partners:
FGA
Fibrinogen alpha chain.
   
 0.982
F2
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.974
APOH
Apolipoprotein H.
   
 0.961
FGG
Fibrinogen gamma chain.
   
 0.954
GC
GC vitamin D binding protein.
   
  
 0.940
PLG
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.935
APOB
Apolipoprotein B.
   
 
 0.918
FGB
Fibrinogen beta chain.
   
 0.917
FABP1
Fatty acid binding protein 1.
   
 
 0.856
FGF19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.853
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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