STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNDC5Fibronectin type III domain containing 5. (208 aa)    
Predicted Functional Partners:
SYNM
Synemin; Belongs to the intermediate filament family.
    
 
 0.635
MYOZ1
Myozenin 1.
      
 0.632
GPLD1
Glycosylphosphatidylinositol specific phospholipase D1.
    
 
 0.607
ENSAPLP00000019578
Uncharacterized protein.
      
 0.594
DCAF7
DDB1 and CUL4 associated factor 7.
      
 0.594
IGF2BP3
Insulin like growth factor 2 mRNA binding protein 3.
      
 0.547
FNDC3B
Fibronectin type III domain containing 3B.
      
 0.545
CA7
Carbonic anhydrase 7; Belongs to the alpha-carbonic anhydrase family.
      
 0.477
TNNT2
Troponin T2, cardiac type.
      
 0.450
TNNI1
Troponin I1, slow skeletal type.
      
 0.450
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.