STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF1SH3 domain containing ring finger 1. (873 aa)    
Predicted Functional Partners:
RHPN1
Rhophilin Rho GTPase binding protein 1.
   
 
 0.624
PAFAH2
Platelet-activating factor acetylhydrolase.
    
 
 0.618
SNX14
Sorting nexin 14.
      
 0.611
SYNRG
Synergin gamma.
    
 
 0.591
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
      
 0.586
PSTPIP2
Proline-serine-threonine phosphatase interacting protein 2.
    
 0.576
RHOV
Ras homolog family member V.
    
  0.566
PAK4
P21 (RAC1) activated kinase 4.
    
 0.552
NCLN
Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.
      
 0.539
MAPK9
Mitogen-activated protein kinase.
    
 
 0.517
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.