STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IF54_ANAPPRF_PROK_I domain-containing protein. (197 aa)    
Predicted Functional Partners:
MRPL21
Mitochondrial ribosomal protein L21.
   
   0.990
U3J0U8_ANAPP
Uncharacterized protein.
  
 
 0.975
ENSAPLP00000021993
Uncharacterized protein.
  
 
 0.975
MRPS16
Mitochondrial ribosomal protein S16.
  
 
 0.974
MRPL19
Mitochondrial ribosomal protein L19.
  
 
 0.972
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.965
MRPL32
Mitochondrial ribosomal protein L32.
  
 
 0.964
MRPL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.947
KARS1
Lysine--tRNA ligase.
  
 
 0.945
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.943
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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