Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC125Coiled-coil domain containing 125. (563 aa)    
Predicted Functional Partners:
CCDC149
Coiled-coil domain containing 149.
      
 0.694
U3HYG5_ANAPP
DUF4201 domain-containing protein.
      
 0.670
TACC1
Transforming acidic coiled-coil containing protein 1.
      
 0.667
CCDC92
Coiled-coil domain containing 92.
      
 0.664
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.655
CCDC113
DUF4201 domain-containing protein.
      
 0.637
RASL11B
RAS like family 11 member B.
      
 0.623
DPY19L1
Uncharacterized protein.
      
 0.611
BICDL1
BICD family like cargo adaptor 1.
      
 0.589
EPSTI1
Epithelial stromal interaction 1.
      
 0.587
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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