Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PUS10Pseudouridine synthase 10. (157 aa)    
Predicted Functional Partners:
ABITRAM
Actin binding transcription modulator.
    
   0.783
TRMT5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
  
 0.601
PUS7L
Pseudouridine synthase 7 like.
   
  
 0.595
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
      
 0.591
PUS7
Pseudouridine synthase 7.
   
  
 0.591
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.584
PUS3
Pseudouridine synthase 3.
   
  
 0.583
SUPT7L
SPT7 like, STAGA complex gamma subunit.
      
 0.581
TAGAP
T cell activation RhoGTPase activating protein.
      
 0.572
ENSAPLP00000024432
Uncharacterized protein.
   
  
 0.570
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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