STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IFD8_ANAPPFe2OG dioxygenase domain-containing protein. (458 aa)    
Predicted Functional Partners:
P4HA3
P4Ha_N domain-containing protein.
 
      0.836
PDIA2
Protein disulfide isomerase family A member 2.
   
 0.682
P4HB
Protein disulfide-isomerase.
   
 0.682
KIF21A
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
   0.663
LRGUK
Uncharacterized protein.
   
   0.570
ACTR6
Actin related protein 6; Belongs to the actin family.
    
   0.531
PDIA3
Protein disulfide-isomerase.
   
 0.450
PDIA4
Protein disulfide-isomerase.
   
 0.450
HOXB4
Homeobox B4.
      
 0.445
U3J5M8_ANAPP
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.431
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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