Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLATPlasminogen activator; Belongs to the peptidase S1 family. (553 aa)    
Predicted Functional Partners:
PLG
Uncharacterized protein; Belongs to the peptidase S1 family.
  
 
0.958
SERPINE2
Serpin family E member 2; Belongs to the serpin family.
   
 0.905
ANXA2
Annexin.
   
 0.864
SERPINF2
SERPIN domain-containing protein; Belongs to the serpin family.
    
 0.851
PDGFC
Platelet derived growth factor C.
    
 0.788
CPB2
Carboxypeptidase B2.
    
 
 0.759
FGA
Fibrinogen alpha chain.
   
 0.750
F3
Coagulation factor III, tissue factor.
   
 0.750
PDGFD
Platelet derived growth factor D.
     
 0.722
THBD
Uncharacterized protein.
   
 0.711
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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