Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JCADJunctional cadherin 5 associated. (1332 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
    
   0.555
UGCG
UDP-glucose ceramide glucosyltransferase.
      
 0.545
IL21R
Interleukin 21 receptor.
  
     0.480
MTPAP
Mitochondrial poly(A) polymerase.
      
 0.466
BAIAP2L2
Uncharacterized protein.
      
 0.455
NUB1
Negative regulator of ubiquitin like proteins 1.
      
 0.439
SORT1
Sortilin.
      
 0.427
TNFSF13B
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
  
     0.414
U3HYL0_ANAPP
HIG1 domain-containing protein.
      
 0.405
ADNP2
ADNP homeobox 2.
      
 0.405
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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