Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U3IFF2_ANAPPUncharacterized protein; Belongs to the intermediate filament family. (586 aa)    
Predicted Functional Partners:
CASP6
Caspase 6; Belongs to the peptidase C14A family.
    
 0.948
LMNB2
Lamin B2; Belongs to the intermediate filament family.
  
  
0.905
LMNB1
Lamin B1; Belongs to the intermediate filament family.
     
0.903
LEMD3
LEM domain containing 3.
    
 0.754
BANF1
Barrier to autointegration factor 1.
    
 0.733
LBR
Lamin B receptor.
   
 
 0.671
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.527
ENSAPLP00000018049
SUN domain-containing protein.
    
 0.512
ENSAPLP00000027508
SUN domain-containing protein.
    
 0.512
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.512
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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