U3IFF7_ANAPP protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

U3IFF7_ANAPP

Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (434 aa)

Predicted Functional Partners:

VIP

0.958

VIPR1

0.903

U3IRG3_ANAPP

0.902

GNB5

0.742

GNB3

0.741

GNB1

0.741

GNB4

0.741

GNGT2

0.717

GNG7

0.714

GNG12

0.714

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNB1	GNB3	ENSAPLP00000010816	ENSAPLP00000002795	G protein subunit beta 1.	G protein subunit beta 3.	0.475
GNB1	GNB5	ENSAPLP00000010816	ENSAPLP00000016983	G protein subunit beta 1.	G protein subunit beta 5.	0.448
GNB1	GNG12	ENSAPLP00000010816	ENSAPLP00000029962	G protein subunit beta 1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.923
GNB1	GNG7	ENSAPLP00000010816	ENSAPLP00000028443	G protein subunit beta 1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.921
GNB1	GNGT2	ENSAPLP00000010816	ENSAPLP00000012380	G protein subunit beta 1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.918
GNB1	U3IFF7_ANAPP	ENSAPLP00000010816	ENSAPLP00000005979	G protein subunit beta 1.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.741
GNB1	U3IRG3_ANAPP	ENSAPLP00000010816	ENSAPLP00000009836	G protein subunit beta 1.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.741
GNB1	VIP	ENSAPLP00000010816	ENSAPLP00000006328	G protein subunit beta 1.	Vasoactive intestinal peptide.	0.516
GNB1	VIPR1	ENSAPLP00000010816	ENSAPLP00000021834	G protein subunit beta 1.	G_PROTEIN_RECEP_F2_4 domain-containing protein.	0.831
GNB3	GNB1	ENSAPLP00000002795	ENSAPLP00000010816	G protein subunit beta 3.	G protein subunit beta 1.	0.475
GNB3	GNB4	ENSAPLP00000002795	ENSAPLP00000012022	G protein subunit beta 3.	G protein subunit beta 4.	0.477
GNB3	GNB5	ENSAPLP00000002795	ENSAPLP00000016983	G protein subunit beta 3.	G protein subunit beta 5.	0.414
GNB3	GNG12	ENSAPLP00000002795	ENSAPLP00000029962	G protein subunit beta 3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.789
GNB3	GNG7	ENSAPLP00000002795	ENSAPLP00000028443	G protein subunit beta 3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.789
GNB3	GNGT2	ENSAPLP00000002795	ENSAPLP00000012380	G protein subunit beta 3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.940
GNB3	U3IFF7_ANAPP	ENSAPLP00000002795	ENSAPLP00000005979	G protein subunit beta 3.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.741
GNB3	U3IRG3_ANAPP	ENSAPLP00000002795	ENSAPLP00000009836	G protein subunit beta 3.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.741
GNB3	VIP	ENSAPLP00000002795	ENSAPLP00000006328	G protein subunit beta 3.	Vasoactive intestinal peptide.	0.446
GNB3	VIPR1	ENSAPLP00000002795	ENSAPLP00000021834	G protein subunit beta 3.	G_PROTEIN_RECEP_F2_4 domain-containing protein.	0.741
GNB4	GNB3	ENSAPLP00000012022	ENSAPLP00000002795	G protein subunit beta 4.	G protein subunit beta 3.	0.477