STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM174CFamily with sequence similarity 174 member C. (141 aa)    
Predicted Functional Partners:
RBIS
Ribosomal biogenesis factor.
      
 0.782
WDR18
WD repeat domain 18.
      
 0.778
TMEM259
Transmembrane protein 259.
      
 0.765
ARHGAP45
Rho GTPase activating protein 45.
    
 
 0.765
LRRCC1
Leucine rich repeat and coiled-coil centrosomal protein 1.
      
 0.763
DAZAP1
DAZ associated protein 1.
      
 0.715
NCAPD3
Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.
      
 0.714
VPS26B
VPS26, retromer complex component B.
      
 0.714
GRIN3B
Glutamate ionotropic receptor NMDA type subunit 3B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
     
 0.681
POLR2E
RNA polymerase II subunit E.
      
 0.679
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.