Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPNE5C2 domain-containing protein. (151 aa)    
Predicted Functional Partners:
CPNE4
C2 domain-containing protein.
 
   0.945
ENSAPLP00000023085
Copine domain-containing protein.
  
   0.573
CPNE7
Copine domain-containing protein.
  
   0.570
ENSAPLP00000020139
C2 domain-containing protein.
  
   0.563
CPNE2
Copine 2.
 
   0.560
ZNF536
Zinc finger protein 536.
      
 0.547
TBC1D15
TBC1 domain family member 15.
      
 0.546
FIBIN
Fin bud initiation factor homolog.
      
 0.481
SERGEF
Secretion regulating guanine nucleotide exchange factor.
   
  
 0.477
ANO9
Anoctamin.
      
 0.443
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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