Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAXO1Stabilizer of axonemal microtubules 1. (401 aa)    
Predicted Functional Partners:
SPACA9
Sperm acrosome associated 9.
    
 
 0.788
CFAP52
Cilia and flagella associated protein 52.
   
 0.749
CFAP57
Cilia and flagella associated protein 57.
   
 0.713
C9orf116
Chromosome 9 open reading frame 116.
    
 0.704
RIBC2
RIB43A domain with coiled-coils 2.
   
 0.685
CEP162
Centrosomal protein 162.
    
 
 0.674
CCDC65
Coiled-coil domain containing 65.
   
 
 0.667
TTC26
Tetratricopeptide repeat domain 26.
    
 0.655
TEKT3
Tektin 3.
   
 
 0.648
ZMYND12
Zinc finger MYND-type containing 12.
    
 
 0.642
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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