STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUT4Terminal uridylyl transferase 4. (1576 aa)    
Predicted Functional Partners:
TUT7
Terminal uridylyl transferase 7.
  
0.940
LIN28A
Lin-28 homolog A.
    
 0.939
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.766
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.680
LIN28B
Lin-28 homolog B.
    
 0.638
POLE2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
     
 0.627
DIS3L2
RNB domain-containing protein.
   
 
 0.619
ENSAPLP00000032196
Rrp44_CSD1 domain-containing protein.
   
 
 0.619
RFC3
Replication factor C subunit 3.
      
 0.570
TENT4B
Terminal nucleotidyltransferase 4B.
   
  
 0.546
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.