STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUT4Terminal uridylyl transferase 4. (1576 aa)    
Predicted Functional Partners:
LIN28A
Lin-28 homolog A.
   
 0.766
DIS3L2
RNB domain-containing protein.
   
 
 0.641
ENSAPLP00000032196
Rrp44_CSD1 domain-containing protein.
   
 
 0.641
PAPOLG
Poly(A) polymerase gamma.
   
  
 0.618
TENT5D
Terminal nucleotidyltransferase 5D.
      
 0.611
ITPRIPL2
ITPRIP like 2.
      
 0.611
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
  
 0.610
TENT5C
Terminal nucleotidyltransferase 5C.
      
 0.586
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.558
GINM1
Glycoprotein integral membrane 1.
      
 0.555
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.