STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMA1OMA1 zinc metallopeptidase. (532 aa)    
Predicted Functional Partners:
OPA1
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.745
YME1L1
YME1 like 1 ATPase.
  
 
 0.689
MFN2
Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.684
RCE1
Ras converting CAAX endopeptidase 1.
    
 
 0.633
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
  
 
 0.630
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.614
ATP23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.612
AOPEP
Aminopeptidase O (putative).
      
 0.611
PRELID1
PRELI domain containing 1.
   
 
 0.607
ROMO1
Reactive oxygen species modulator 1.
    
 
 0.595
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.