Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPIGPeptidylprolyl isomerase G. (752 aa)    
Predicted Functional Partners:
SLU7
SLU7 homolog, splicing factor.
   
 0.957
PTGES3
Prostaglandin E synthase 3.
   
 0.898
NKAP
NFKB activating protein.
   
 0.886
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.885
TRA2A
Transformer 2 alpha homolog.
   
 0.839
CDC40
Cell division cycle 40.
   
 0.821
PTGES3L
Prostaglandin E synthase 3 like.
   
 0.806
DHX38
DEAH-box helicase 38.
   
 0.800
SYF2
SYF2 pre-mRNA splicing factor.
   
 0.800
FAM32A
Family with sequence similarity 32 member A.
    
 0.799
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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