STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPTX2Neuronal pentraxin 2. (429 aa)    
Predicted Functional Partners:
RNF2
Ring finger protein 2.
    
 0.696
ENSAPLP00000026465
RAWUL domain-containing protein.
    
 0.696
EED
Embryonic ectoderm development.
    
 0.560
PPP1R14C
Protein phosphatase 1 regulatory inhibitor subunit 14C.
   
    0.508
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 
 0.481
TDRD7
Tudor domain containing 7.
    
 
 0.470
PCGF5
Polycomb group ring finger 5.
    
 0.468
PCGF6
Polycomb group ring finger 6.
    
 0.468
BMI1
RING-type domain-containing protein.
    
 0.468
PCGF3
Polycomb group ring finger 3.
    
 0.468
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.