Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GPBP1GC-rich promoter binding protein 1. (471 aa)    
Predicted Functional Partners:
FNDC11
Fibronectin type III domain containing 11.
    
   0.820
NNT
Nicotinamide nucleotide transhydrogenase.
      
 0.603
PSMC1
Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family.
      
 0.588
EAPP
E2F associated phosphoprotein.
      
 0.546
VBP1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
      
 0.545
DRG2
Developmentally regulated GTP binding protein 2.
      
 0.544
PCMT1
Protein-L-isoaspartate O-methyltransferase.
    
   0.524
CNOT1
CCR4-NOT transcription complex subunit 1.
   
   0.508
SH3D19
SH3 domain containing 19.
      
 0.503
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 
 0.502
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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