STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALRNKalirin RhoGEF kinase. (2922 aa)    
Predicted Functional Partners:
MAPK6
Mitogen-activated protein kinase 6.
    
0.900
CDC42
Cell division cycle 42.
   
 0.805
RHOA
Ras homolog family member A.
   
 0.683
RHOC
Uncharacterized protein.
   
 0.683
RHOU
Ras homolog family member U.
   
 0.654
LRCH3
Leucine rich repeats and calponin homology domain containing 3.
     
 0.654
DISC1
DISC1 scaffold protein.
    
 
 0.649
ZDHHC14
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.647
RHOG
Ras homolog family member G.
   
 0.643
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
  
 0.633
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.