STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTSL1Uncharacterized protein. (698 aa)    
Predicted Functional Partners:
HTRA3
HtrA serine peptidase 3.
      
 0.608
UBE2R2
Ubiquitin conjugating enzyme E2 R2; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.557
NIPBL
Nipped-B protein.
   
  
 0.549
KCMF1
Uncharacterized protein.
      
 0.547
POFUT2
Protein O-fucosyltransferase 2.
     
 0.488
B3GLCT
Beta 3-glucosyltransferase.
    
 0.480
RSPO3
R-spondin 3.
      
 0.466
DMRT3
Doublesex and mab-3 related transcription factor 3.
    
 
 0.459
AGT
Angiotensinogen; Belongs to the serpin family.
      
 0.455
DKK3
Dickkopf WNT signaling pathway inhibitor 3.
      
 0.452
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.