STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTSL1Uncharacterized protein. (698 aa)    
Predicted Functional Partners:
HTRA3
HtrA serine peptidase 3.
      
 0.601
UBE2R2
Ubiquitin conjugating enzyme E2 R2; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.593
KCMF1
Uncharacterized protein.
      
 0.587
POFUT2
Protein O-fucosyltransferase 2.
     
 0.561
NIPBL
Nipped-B protein.
   
  
 0.555
RSPO3
R-spondin 3.
      
 0.529
OSR1
Odd-skipped related transcription factor 1.
      
 0.501
DMRT3
Doublesex and mab-3 related transcription factor 3.
    
 
 0.486
AGT
Angiotensinogen; Belongs to the serpin family.
      
 0.484
MAP3K1
Mitogen-activated protein kinase kinase kinase 1.
      
 0.484
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.