STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IFT6_ANAPPUncharacterized protein. (377 aa)    
Predicted Functional Partners:
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.948
TPM2
Tropomyosin 2; Belongs to the tropomyosin family.
   
 0.948
MYL3
Myosin light chain 3.
   
 0.930
MYL4
Uncharacterized protein.
   
 0.930
TNNT2
Troponin T2, cardiac type.
   
 0.924
ACTC1
Actin alpha cardiac muscle 1.
  
  
 
0.900
ACTL6A
Actin like 6A; Belongs to the actin family.
    
0.749
ACTR2
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
  
0.735
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
     
 0.729
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.728
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.