CLNS1A protein (Anas platyrhynchos) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CLNS1A

Uncharacterized protein. (114 aa)

Predicted Functional Partners:

WDR77

0.998

SNRPD1

0.987

SNRPD3

0.980

ENSAPLP00000021357

0.977

SNRPF

0.966

LSM3

0.955

LSM6

0.949

SNRPG

0.900

SMN1

0.875

COPRS

0.855

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLNS1A	COPRS	ENSAPLP00000006149	ENSAPLP00000023991	Uncharacterized protein.	Uncharacterized protein.	0.855
CLNS1A	ENSAPLP00000021357	ENSAPLP00000006149	ENSAPLP00000021357	Uncharacterized protein.	Uncharacterized protein.	0.977
CLNS1A	LSM3	ENSAPLP00000006149	ENSAPLP00000014331	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.955
CLNS1A	LSM6	ENSAPLP00000006149	ENSAPLP00000012384	Uncharacterized protein.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.949
CLNS1A	SMN1	ENSAPLP00000006149	ENSAPLP00000025318	Uncharacterized protein.	Tudor domain-containing protein.	0.875
CLNS1A	SNRPD1	ENSAPLP00000006149	ENSAPLP00000012020	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.987
CLNS1A	SNRPD3	ENSAPLP00000006149	ENSAPLP00000008346	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.980
CLNS1A	SNRPF	ENSAPLP00000006149	ENSAPLP00000025809	Uncharacterized protein.	Small nuclear ribonucleoprotein polypeptide F.	0.966
CLNS1A	SNRPG	ENSAPLP00000006149	ENSAPLP00000003436	Uncharacterized protein.	Small nuclear ribonucleoprotein polypeptide G.	0.900
CLNS1A	WDR77	ENSAPLP00000006149	ENSAPLP00000013215	Uncharacterized protein.	WD repeat domain 77.	0.998
COPRS	CLNS1A	ENSAPLP00000023991	ENSAPLP00000006149	Uncharacterized protein.	Uncharacterized protein.	0.855
COPRS	ENSAPLP00000021357	ENSAPLP00000023991	ENSAPLP00000021357	Uncharacterized protein.	Uncharacterized protein.	0.919
COPRS	LSM6	ENSAPLP00000023991	ENSAPLP00000012384	Uncharacterized protein.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.693
COPRS	WDR77	ENSAPLP00000023991	ENSAPLP00000013215	Uncharacterized protein.	WD repeat domain 77.	0.973
ENSAPLP00000021357	CLNS1A	ENSAPLP00000021357	ENSAPLP00000006149	Uncharacterized protein.	Uncharacterized protein.	0.977
ENSAPLP00000021357	COPRS	ENSAPLP00000021357	ENSAPLP00000023991	Uncharacterized protein.	Uncharacterized protein.	0.919
ENSAPLP00000021357	LSM6	ENSAPLP00000021357	ENSAPLP00000012384	Uncharacterized protein.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.499
ENSAPLP00000021357	SMN1	ENSAPLP00000021357	ENSAPLP00000025318	Uncharacterized protein.	Tudor domain-containing protein.	0.846
ENSAPLP00000021357	SNRPD1	ENSAPLP00000021357	ENSAPLP00000012020	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.907
ENSAPLP00000021357	SNRPD3	ENSAPLP00000021357	ENSAPLP00000008346	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.904