CLNS1A protein (Anas platyrhynchos) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

CLNS1A

Uncharacterized protein. (114 aa)

Predicted Functional Partners:

SNRPD1

0.985

ENSAPLP00000021357

0.976

WDR77

0.961

SMN1

0.912

SNRPD3

0.907

SPATA6

0.899

WDR33

0.835

SPACA6

0.827

SNRPF

0.801

SNRPG

0.791

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLNS1A	ENSAPLP00000021357	ENSAPLP00000006149	ENSAPLP00000021357	Uncharacterized protein.	Uncharacterized protein.	0.976
CLNS1A	SMN1	ENSAPLP00000006149	ENSAPLP00000025318	Uncharacterized protein.	Tudor domain-containing protein.	0.912
CLNS1A	SNRPD1	ENSAPLP00000006149	ENSAPLP00000012020	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.985
CLNS1A	SNRPD3	ENSAPLP00000006149	ENSAPLP00000008346	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.907
CLNS1A	SNRPF	ENSAPLP00000006149	ENSAPLP00000025809	Uncharacterized protein.	Small nuclear ribonucleoprotein polypeptide F.	0.801
CLNS1A	SNRPG	ENSAPLP00000006149	ENSAPLP00000003436	Uncharacterized protein.	Small nuclear ribonucleoprotein polypeptide G.	0.791
CLNS1A	SPACA6	ENSAPLP00000006149	ENSAPLP00000027472	Uncharacterized protein.	Ig-like domain-containing protein.	0.827
CLNS1A	SPATA6	ENSAPLP00000006149	ENSAPLP00000022056	Uncharacterized protein.	Spermatogenesis associated 6.	0.899
CLNS1A	WDR33	ENSAPLP00000006149	ENSAPLP00000009606	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.835
CLNS1A	WDR77	ENSAPLP00000006149	ENSAPLP00000013215	Uncharacterized protein.	WD repeat domain 77.	0.961
ENSAPLP00000021357	CLNS1A	ENSAPLP00000021357	ENSAPLP00000006149	Uncharacterized protein.	Uncharacterized protein.	0.976
ENSAPLP00000021357	SMN1	ENSAPLP00000021357	ENSAPLP00000025318	Uncharacterized protein.	Tudor domain-containing protein.	0.650
ENSAPLP00000021357	SNRPD1	ENSAPLP00000021357	ENSAPLP00000012020	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.741
ENSAPLP00000021357	SNRPD3	ENSAPLP00000021357	ENSAPLP00000008346	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.770
ENSAPLP00000021357	SPACA6	ENSAPLP00000021357	ENSAPLP00000027472	Uncharacterized protein.	Ig-like domain-containing protein.	0.460
ENSAPLP00000021357	WDR33	ENSAPLP00000021357	ENSAPLP00000009606	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.941
ENSAPLP00000021357	WDR77	ENSAPLP00000021357	ENSAPLP00000013215	Uncharacterized protein.	WD repeat domain 77.	0.996
SMN1	CLNS1A	ENSAPLP00000025318	ENSAPLP00000006149	Tudor domain-containing protein.	Uncharacterized protein.	0.912
SMN1	ENSAPLP00000021357	ENSAPLP00000025318	ENSAPLP00000021357	Tudor domain-containing protein.	Uncharacterized protein.	0.650
SMN1	SNRPD1	ENSAPLP00000025318	ENSAPLP00000012020	Tudor domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.961