Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APEX1 | ENSAPLP00000028415 | ENSAPLP00000018420 | ENSAPLP00000028415 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | XRCC1_N domain-containing protein. | 0.642 |
| APEX1 | FEN1 | ENSAPLP00000018420 | ENSAPLP00000001147 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.951 |
| APEX1 | LIG1 | ENSAPLP00000018420 | ENSAPLP00000012998 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | DNA ligase. | 0.928 |
| APEX1 | LIG3 | ENSAPLP00000018420 | ENSAPLP00000008702 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | DNA ligase. | 0.748 |
| APEX1 | LIG4 | ENSAPLP00000018420 | ENSAPLP00000001095 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | DNA ligase. | 0.697 |
| APEX1 | NEIL1 | ENSAPLP00000018420 | ENSAPLP00000022270 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Nei like DNA glycosylase 1. | 0.426 |
| APEX1 | REC114 | ENSAPLP00000018420 | ENSAPLP00000015514 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | REC114 meiotic recombination protein. | 0.681 |
| APEX1 | TDP1 | ENSAPLP00000018420 | ENSAPLP00000015477 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | Tyrosyl-DNA phosphodiesterase 1. | 0.706 |
| APEX1 | U3IFZ0_ANAPP | ENSAPLP00000018420 | ENSAPLP00000006162 | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | DNA_pol_B_thumb domain-containing protein. | 0.725 |
| ENSAPLP00000028415 | APEX1 | ENSAPLP00000028415 | ENSAPLP00000018420 | XRCC1_N domain-containing protein. | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.642 |
| ENSAPLP00000028415 | FEN1 | ENSAPLP00000028415 | ENSAPLP00000001147 | XRCC1_N domain-containing protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.826 |
| ENSAPLP00000028415 | LIG1 | ENSAPLP00000028415 | ENSAPLP00000012998 | XRCC1_N domain-containing protein. | DNA ligase. | 0.918 |
| ENSAPLP00000028415 | LIG3 | ENSAPLP00000028415 | ENSAPLP00000008702 | XRCC1_N domain-containing protein. | DNA ligase. | 0.991 |
| ENSAPLP00000028415 | LIG4 | ENSAPLP00000028415 | ENSAPLP00000001095 | XRCC1_N domain-containing protein. | DNA ligase. | 0.917 |
| ENSAPLP00000028415 | NEIL1 | ENSAPLP00000028415 | ENSAPLP00000022270 | XRCC1_N domain-containing protein. | Nei like DNA glycosylase 1. | 0.793 |
| ENSAPLP00000028415 | REC114 | ENSAPLP00000028415 | ENSAPLP00000015514 | XRCC1_N domain-containing protein. | REC114 meiotic recombination protein. | 0.934 |
| ENSAPLP00000028415 | TDP1 | ENSAPLP00000028415 | ENSAPLP00000015477 | XRCC1_N domain-containing protein. | Tyrosyl-DNA phosphodiesterase 1. | 0.717 |
| ENSAPLP00000028415 | U3IFZ0_ANAPP | ENSAPLP00000028415 | ENSAPLP00000006162 | XRCC1_N domain-containing protein. | DNA_pol_B_thumb domain-containing protein. | 0.830 |
| ENSAPLP00000028415 | XRCC6 | ENSAPLP00000028415 | ENSAPLP00000004007 | XRCC1_N domain-containing protein. | X-ray repair cross complementing 6. | 0.757 |
| FEN1 | APEX1 | ENSAPLP00000001147 | ENSAPLP00000018420 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. | 0.951 |
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