Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGAEIntegrin subunit alpha E; Belongs to the integrin alpha chain family. (1391 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.925
ITGB2
Integrin beta.
   
 0.925
FN1
Fibronectin 1.
    
 0.920
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.863
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.863
SLC39A13
Solute carrier family 39 member 13.
   
  
 0.860
SLC15A2
Solute carrier family 15 member 2.
   
  
 0.859
MRPS14
Mitochondrial ribosomal protein S14.
      
 0.859
PRL
Prolactin.
      
 0.846
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.838
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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