Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF7Ring finger protein 7. (107 aa)    
Predicted Functional Partners:
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.996
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.995
ENSAPLP00000023149
Uncharacterized protein.
   
 0.990
UBE2F
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.987
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.983
UBE2C
Ubiquitin conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.954
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.935
UBXN7
UBX domain-containing protein 7.
    
 0.922
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.919
DDB1
Damage specific DNA binding protein 1.
    
 0.913
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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