Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RNF165Ring finger protein 165. (285 aa)    
Predicted Functional Partners:
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.828
LOXHD1
Lipoxygenase homology domains 1.
    
 0.673
HERPUD1
Homocysteine inducible ER protein with ubiquitin like domain 1.
      
 0.666
SLC39A6
Solute carrier family 39 member 6.
      
 0.642
UBE2D2
Ubiquitin conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.596
UBE2D3
Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.596
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
   
 0.554
UBXN7
UBX domain-containing protein 7.
   
 
 0.530
ENSAPLP00000023897
Uncharacterized protein.
    
  0.512
PLEKHD1
Pleckstrin homology and coiled-coil domain containing D1.
      
 0.499
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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