Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (760 aa)    
Predicted Functional Partners:
PAPOLG
Poly(A) polymerase gamma.
  
  
0.944
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.944
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
   
 0.919
RBBP6
RB binding protein 6, ubiquitin ligase.
   
 0.916
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.911
WDR33
WD_REPEATS_REGION domain-containing protein.
   
 0.905
PCF11
Uncharacterized protein.
    
 0.899
CSTF2
Cleavage stimulation factor subunit 2.
    
 0.896
ENSAPLP00000024497
Fip1 domain-containing protein.
   
 0.890
EXOSC10
Exosome component 10.
    
 0.875
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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