STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC43Leucine rich repeat containing 43. (614 aa)    
Predicted Functional Partners:
LRRD1
Uncharacterized protein.
    
 0.842
U3J0F4_ANAPP
Uncharacterized protein.
    
 
 0.755
SPAG17
Sperm associated antigen 17.
  
 
 
 0.633
IQCK
IQ motif containing K.
      
 0.616
SHOC2
SHOC2 leucine rich repeat scaffold protein.
    
 0.597
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.578
SPATA4
Spermatogenesis associated 4.
   
   0.563
U3IJ22_ANAPP
Uncharacterized protein.
    
 
 0.562
LRGUK
Uncharacterized protein.
    
  0.562
DLEC1
DLEC1 cilia and flagella associated protein.
    
  0.558
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.