Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPRIN2Caprin family member 2. (902 aa)    
Predicted Functional Partners:
CAPRIN2-2
C1q domain-containing protein.
 
      0.900
FXR1
FMR1 autosomal homolog 1.
   
 
 0.724
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.712
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.712
USP10
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.681
FMR1
Fragile X mental retardation 1.
   
 
 0.655
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
    
 
 0.558
SPOPL
Speckle type BTB/POZ protein like.
    
 
 0.529
SPOP
Speckle type BTB/POZ protein.
    
 
 0.529
EIF3B
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.522
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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