STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CACFD1Calcium channel flower domain containing 1. (174 aa)    
Predicted Functional Partners:
TMEM159
Transmembrane protein 159.
    
   0.694
RABEPK
Rab9 effector protein with kelch motifs.
      
 0.667
TMEM181
Uncharacterized protein.
      
 0.588
FKBP5
Peptidylprolyl isomerase.
      
 0.585
MMAA
Metabolism of cobalamin associated A.
      
 0.584
U3J6X4_ANAPP
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
      
 0.584
B3GALT6
Hexosyltransferase.
      
 0.566
GPSM1
G protein signaling modulator 1.
      
 0.547
FAM163B
Family with sequence similarity 163 member B.
      
 0.547
MAGOH
Mago homolog, exon junction complex subunit.
      
 0.545
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.