Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNALI1Dynein axonemal light intermediate chain 1. (254 aa)    
Predicted Functional Partners:
DNAI1
Dynein axonemal intermediate chain 1.
   
 
 0.953
PACRG
Parkin coregulated.
  
 
 0.934
RSPH3
Radial spoke head 3.
  
 
 0.928
DNAI2
Dynein axonemal intermediate chain 2.
   
 
 0.913
CCDC39
Coiled-coil domain containing 39.
   
 
 0.910
DRC7
Dynein regulatory complex subunit 7.
   
 
 0.898
GAS8
Growth arrest specific 8.
  
 
 0.888
EFHC1
EF-hand domain containing 1.
  
 
 0.884
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.884
U3I6X6_ANAPP
Uncharacterized protein.
   
 
 0.881
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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