Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARMC7Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
ENSAPLP00000023047
Uncharacterized protein.
    
 
 0.852
CRIPT
CXXC repeat containing interactor of PDZ3 domain.
    
 
 0.819
U3IYL3_ANAPP
Uncharacterized protein.
    
 
 0.816
SRRM1
Serine and arginine repetitive matrix 1.
    
   0.815
CWC15
CWC15 spliceosome associated protein homolog.
    
   0.815
PLRG1
Pleiotropic regulator 1.
    
   0.815
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
    
   0.815
SF3B1
Splicing factor 3b subunit 1.
    
   0.815
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
   0.815
SF3B3
Splicing factor 3b subunit 3.
    
   0.815
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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